Gene

wdr48b

ID
ZDB-GENE-030131-6622
Name
WD repeat domain 48b
Symbol
wdr48b Nomenclature History
Previous Names
  • wdr48
  • fk50c12
  • wu:fd19a04
  • wu:fk50c12
  • zgc:66229 (1)
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Is predicted to enable double-stranded DNA binding activity; single-stranded DNA binding activity; and ubiquitin binding activity. Involved in double-strand break repair via homologous recombination; positive regulation of nitrogen compound metabolic process; and protein deubiquitination. Acts upstream of or within DNA repair. Predicted to be located in nucleus. Orthologous to human WDR48 (WD repeat domain 48).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With wdr48b Human Ortholog
No data available
Associated With wdr48b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019775 WD40 repeat, conserved site
Family IPR021772 WDR48/Bun107
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Repeat IPR001680 WD40 repeat
Repeat IPR020472 G-protein beta WD-40 repeat
Domain Details Per Protein
Protein Length G-protein beta WD-40 repeat WD40 repeat WD40 repeat, conserved site WD40-repeat-containing domain superfamily WD40/YVTN repeat-like-containing domain superfamily WDR48/Bun107
UniProtKB:Q6PFM9 677
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations