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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-6596
Gene Name: si:dkey-42i9.6
Gene Symbol: si:dkey-42i9.6
Sequence Ontology ID : SO:0000704

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Previous Names: fk47a03, wu:fk47a03, zgc:153224

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the integral component of membrane. Orthologous to human SHISA5 (shisa family member 5).

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu569]
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:dkey-42i9.6 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:dkey-42i9.6 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component integral component of membrane (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR026910 (1)
  • Pfam:PF13908 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:dkey-42i9.6-201 (1) 2184
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-42i9.6 No data available
    MARKER RELATIONSHIPS
    si:dkey-42i9.6Contained in: [BAC] DKEY-42I9 (1) (order this)
    si:dkey-42i9.6Encodes: [EST] eu569 (1), fk47a03
    [cDNA] MGC:153224 (1) (order this), MGC:191772 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044870 (1) 2136bp
    Genomic GenBank:BX465868 (1) 222195bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q08CE0 (1) 261aa
    Sequence Clusters UniGene:107461 (1)
    Sequence Information (all 20)
    ORTHOLOGY for si:dkey-42i9.6 (Chr: 22)
    CITATIONS (17)