ZFIN ID: ZDB-GENE-030131-6459
Gene Name: CAP, adenylate cyclase-associated protein 1 (yeast)
Gene Symbol: cap1    Nomenclature History

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Previous Names: fj98f01 (1), wu:fj98f01 (1), zgc:63872 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have actin monomer binding activity and adenylate cyclase binding activity. Involved in mesodermal cell migration and somitogenesis. Predicted to localize to cortical actin cytoskeleton. Is expressed in adaxial cell; ectoderm; heart; segmental plate; and skeletal muscle. Orthologous to human CAP1 (cyclase associated actin cytoskeleton regulatory protein 1).
Genome Resources: Alliance (1),  Gene:334527 (1),  Ensembl(GRCz11):ENSDARG00000016350 (2)
GENE EXPRESSION
All Expression Data: 10 figures from 5 publications
Directly Submitted Expression Data: 4 figures (18 images) from Rauch et al., 2003 [fj98f01]
Wild-type Stages, Structures: Gastrula:75%-epiboly (8.0h-9.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-cap1 N/A 4
MO2-cap1 N/A 2
PHENOTYPE
Data: Fig. 6 from Daggett et al., 2007
Observed in:
DISEASE ASSOCIATED WITH cap1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cap1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mesodermal cell migration (more)
Cellular Component cortical actin cytoskeleton (more)
Molecular Function actin monomer binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA cap1-201 (1)    Ensembl 1788
cap1-202 (1)    Ensembl 692
ncRNA cap1-003 (1)    Ensembl 452
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM cap1 No data available
MARKER RELATIONSHIPS
cap1 Contained in: [Fosmid] CH1073-365B9 (1)
cap1 Contains: [SNP] rs3728993 (1), rs3728994 (1)
cap1 Encodes: [EST] fj98f01 (order this)
[cDNA] MGC:63872 (1), MGC:171388 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_199909 (1) 1726 nt
Genomic GenBank:CU611043 (1) 34732 nt
Select Tool
Polypeptide UniProtKB:A7E2H8 (1) 463 aa
Sequence Information (all 16)
ORTHOLOGY for cap1 ( Chr: 19 )
CITATIONS (27)