ZFIN ID: ZDB-GENE-030131-6321
Gene Name: ankyrin repeat and MYND domain containing 2a
Gene Symbol: ankmy2a    Nomenclature History

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Previous Names: fi46e08, wu:fi46e08, zgc:55491

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Involved in regulation of smoothened signaling pathway. Is expressed in neural tube. Orthologous to human ANKMY2 (ankyrin repeat and MYND domain containing 2).
Genome Resources: Alliance (1),  Gene:334389 (1),  Ensembl(GRCz11):ENSDARG00000005948 (2)
GENE EXPRESSION
All Expression Data: Fig. 7 from Saita et al., 2014
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17236 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22692 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ankmy2a N/A 1
    MO2-ankmy2a N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ankmy2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ankmy2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of smoothened signaling pathway (more)
    Cellular Component cellular_component (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ankmy2a-201 (1)    Ensembl 2189
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ankmy2a No data available
    MARKER RELATIONSHIPS
    ankmy2a Contained in: [BAC] CH73-144M15 (1), CH73-352P12 (1)
    ankmy2a Encodes: [EST] fi46e08
    [cDNA] MGC:55491 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199894 (1) 2197 nt
    Genomic GenBank:FP102311 (1) 115570 nt
    Select Tool
    Polypeptide UniProtKB:F1QE34 (1) 421 aa
    Sequence Information (all 12)
    ORTHOLOGY for ankmy2a ( Chr: 15 )
    CITATIONS (21)