ZFIN ID: ZDB-GENE-030131-6320
Gene Name: chromodomain helicase DNA binding protein 8
Gene Symbol: chd8
Sequence Ontology ID : SO:0000704

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Previous Names: si:ch211-10e2.6 (1), wu:fi45h08

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 4 from Bernier et al., 2014
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Day 4 (96.0h-120.0h)
 
PHENOTYPE
Data: 4 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH chd8 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
{Autism, susceptibility to, 18} 615032
DISEASE ASSOCIATED WITH chd8 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process brain development (more)
Cellular Component MLL1 complex (more)
Molecular Function ATP binding (more)
GO Terms (all 26)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000330 (1)
  • InterPro:IPR000953 (1)
  • InterPro:IPR001650 (1)
  • InterPro:IPR006576 (1)
  • InterPro:IPR014001 (1)
  • InterPro:IPR016197 (1)
  • InterPro:IPR023780 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR034724 (1)
  • InterPro:IPR037259 (1)
  • InterPro:IPR038718 (1)
  • PROSITE:PS50013 (1)
  • PROSITE:PS51192 (1)
  • PROSITE:PS51194 (1)
  • Pfam:PF00176 (1)
  • Pfam:PF00271 (1)
  • Pfam:PF00385 (1)
  • Pfam:PF07533 (1)
  • EC:3.6.4.12 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA chd8-001 (1) 7389
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM chd8 No data available
    MARKER RELATIONSHIPS
    chd8Contained in: [BAC] CH211-10E2 (1) (order this)
    chd8Encodes: [EST] fi45h08
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001202452 (1) 8356bp
    Genomic GenBank:AL928674 (1) 205118bp Blast at MegaBLAST
    Polypeptide UniProtKB:E7FH24 (1) 2555aa
    Sequence Clusters UniGene:81397 (1)
    Sequence Information (all 14)
    OTHER chd8 GENE PAGES
  • Alliance (1)
  • Gene:568214 (1)
  • VEGA:OTTDARG00000025015 (1)
  • ORTHOLOGY for chd8 (Chr: 2)
    CITATIONS (22)