ZFIN ID: ZDB-GENE-030131-6311
Gene Name: AT rich interactive domain 2 (ARID, RFX-like)
Gene Symbol: arid2
Sequence Ontology ID : SO:0000704

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Previous Names: fi45a01, si:ch211-132p20.1, wu:fi45a01, zgc:152901

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6926 Point Mutation Unknown Premature Stop ENU
sa20174 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40197 Point Mutation Unknown Splice Site ENU
    Targeting reagents: MO1-arid2 (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH arid2 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001606 (1)
  • InterPro:IPR003150 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • InterPro:IPR036431 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS51011 (1)
  • PROSITE:PS51526 (1)
  • Pfam:PF01388 (1)
  • Pfam:PF02257 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arid2-001 (1) 6463
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arid2 No data available
    MARKER RELATIONSHIPS
    arid2Contained in: [BAC] CH211-132P20 (1) (order this), CH211-203H15 (1) (order this)
    arid2Encodes: [EST] fi45a01
    [cDNA] MGC:152901 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077763 (1) 5556bp
    Genomic GenBank:AL929171 (1) 176577bp
    Select Tool
    Polypeptide UniProtKB:F6NXG0 (1) 1572aa
    Sequence Clusters UniGene:79170 (1)
    Sequence Information (all 18)
    OTHER arid2 GENE PAGES
  • Alliance (1)
  • Gene:566352 (1)
  • VEGA:OTTDARG00000007317 (1)
  • Ensembl(GRCz10):ENSDARG00000007413 (1)
  • ORTHOLOGY for arid2 (Chr: 4)
    CITATIONS (19)