ZFIN ID: ZDB-GENE-030131-6311
Gene Name: AT rich interactive domain 2 (ARID, RFX-like)
Gene Symbol: arid2
Previous Names: fi45a01, si:ch211-132p20.1, wu:fi45a01, zgc:152901
Location: Chr: 4   Details
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa20174
Knockdown reagents: MO1-arid2 (1)
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001606 (1)
  • InterPro:IPR003150 (1)
  • InterPro:IPR007087 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR011991 (1)
  • InterPro:IPR015880 (1)
  • InterPro:IPR016024 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS51011 (1)
  • PROSITE:PS51526 (1)
  • Pfam:PF01388 (1)
  • Pfam:PF02257 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arid2-001 (1) 6463
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM arid2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    arid2 Contained in: [BAC] CH211-132P20 (1) (order this), CH211-203H15 (1) (order this)
    arid2 Encodes: [EST] fi45a01
    [cDNA] MGC:152901 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077763 (1) 5556 bp
    Genomic GenBank:AL929171 (1) 176577 bp
    Select Tool
    Polypeptide UniProtKB:E7F3J3 (1) 1573 aa
    Sequence Clusters UniGene:79170 (1)
    Sequence Information (all 17)
    OTHER arid2 GENE PAGES
  • Gene:566352 (1)
  • VEGA:OTTDARG00000007317 (1)
  • Ensembl(Zv9):ENSDARG00000007413 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish arid2 4  
    Human ARID2 12 (12q12)
  • OMIM:609539
  • Gene:196528
  • Mouse Arid2 15 ( 52.37 cM)
  • MGI:1924294
  • Gene:77044
  • Orthology Details
    CITATIONS (16)