ZFIN ID: ZDB-GENE-030131-6298
Gene Name: si:ch211-241e1.5
Gene Symbol: si:ch211-241e1.5    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fi43c02, wu:fi43c02

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human ZNF572 (zinc finger protein 572).
Genome Resources: Alliance (1),  Gene:567583 (1),  Ensembl(GRCz11):ENSDARG00000008906 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa8573 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-241e1.5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-241e1.5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription by RNA polymerase II (more)
    Cellular Component nucleus (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-241e1.5-201 (1)    Ensembl 1828
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-241e1.5 No data available
    MARKER RELATIONSHIPS
    si:ch211-241e1.5 Contained in: [BAC] CH211-241E1 (1)
    si:ch211-241e1.5 Encodes: [EST] fi43c02
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001126425 (1) 1828 nt
    Genomic GenBank:AL935300 (1) 157088 nt
    Select Tool
    Polypeptide UniProtKB:A8DZG6 (1) 542 aa
    Sequence Information (all 7)
    ORTHOLOGY for si:ch211-241e1.5 ( Chr: 2 )
    CITATIONS (14)