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ZIRC
ZFIN ID: ZDB-GENE-030131-6294
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Gene Name: nucleolar protein 6 (RNA-associated)
Gene Symbol: nol6
Sequence Ontology ID : SO:0000704

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Previous Name: wu:fi43b02

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Predicted to be involved in rRNA processing and tRNA export from nucleus. Predicted to localize to the CURI complex; UTP-C complex; and small-subunit  ...
GENE EXPRESSION
All Expression Data: Fig. 3 from Wan et al., 2016
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa841 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa962 Point Mutation Unknown Splice Site ENU
    sa7003 Point Mutation Unknown Splice Site ENU
    sa12332 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa26570 Point Mutation Unknown Splice Site ENU
    sa38501 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa38502 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa40553 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nol6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nol6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process rRNA processing (more)
    Cellular Component integral component of membrane (more)
    Molecular Function RNA binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005554 (1)
  • InterPro:IPR035082 (1)
  • InterPro:IPR035367 (1)
  • InterPro:IPR035368 (1)
  • InterPro:IPR035369 (1)
  • InterPro:IPR035370 (1)
  • InterPro:IPR035371 (1)
    		•
  • Pfam:PF03813 (1)
  • Pfam:PF17403 (1)
  • Pfam:PF17404 (1)
  • Pfam:PF17405 (1)
  • Pfam:PF17406 (1)
  • Pfam:PF17407 (1)
    		•
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nol6 No data available
    MARKER RELATIONSHIPS
    nol6Contains: [SNP] rs3727908 (1), rs3727909 (1), rs3727910 (1), rs3727911 (1), rs3727912 (1)
    nol6Encodes: [EST] fi43b02, IMAGE:6963991
    [cDNA] MGC:171427 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001161511 (1)
    Select Tool
    Polypeptide UniProtKB:F1Q4S6 (1) 1153aa
    Select Tool
    Sequence Clusters UniGene:1726 (1)
    Sequence Information (all 18)
    OTHER nol6 GENE PAGES
  • Alliance (1)
  • Gene:334362 (1)
  • Ensembl(GRCz11):ENSDARG00000059711 (1)
    • ORTHOLOGY for nol6 (Chr: 5)
    CITATIONS (17)