ZFIN is now using GRCz12tu for Genomic Data
Gene
mgrn1a
- ID
- ZDB-GENE-030131-6192
- Name
- mahogunin, ring finger 1a
- Symbol
- mgrn1a Nomenclature History
- Previous Names
-
- mgrn1
- wu:fi38c03
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in endosome to lysosome transport; negative regulation of signal transduction; and protein ubiquitination. Predicted to be active in early endosome and nucleus. Orthologous to human MGRN1 (mahogunin ring finger 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55978 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | E3 ubiquitin-protein ligase MGRN1/RNF157-like | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type |
|---|---|---|---|---|---|
| UniProtKB:Q7ZUL9 | InterPro | 529 | |||
| UniProtKB:B7ZVH3 | InterPro | 554 | |||
| UniProtKB:B0JZJ6 | InterPro | 529 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
mgrn1a-201
(1)
|
Ensembl | 2,861 nt | ||
| mRNA |
mgrn1a-202
(1)
|
Ensembl | 730 nt | ||
| mRNA |
mgrn1a-203
(1)
|
Ensembl | 4,827 nt | ||
| mRNA |
mgrn1a-204
(1)
|
Ensembl | 2,107 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers