ZFIN ID: ZDB-GENE-030131-616
Gene Name: guanine nucleotide binding protein-like 3 (nucleolar)
Gene Symbol: gnl3
Sequence Ontology ID : SO:0000704

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Previous Names: id:ibd2914, nstm (1), nucleostemin, wu:fb38a04, wu:fc55d07, zgc:123093

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Directly Submitted Expression Data: 3 figures (5 images) from Kudoh et al., 2001 [ibd2914]
Wild-type Stages, Structures: Segmentation:5-9 somites (11.66h-14.0h) to Pharyngula:Prim-15 (30.0h-36.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi299Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hu3259 Point Mutation Exon 5 Premature Stop
    sa41766 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 15 figures from 5 publications
    Observed in:
    DISEASE ASSOCIATED WITH gnl3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gnl3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (more)
    Cellular Component nucleolus (more)
    Molecular Function GTP binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006073 (1)
  • InterPro:IPR014813 (1)
  • InterPro:IPR023179 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR030378 (1)
  • PROSITE:PS51721 (1)
  • Pfam:PF01926 (1)
  • Pfam:PF08701 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gnl3-001 (1) 2090
    ncRNA gnl3-002 (1) 773
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gnl3 No data available
    MARKER RELATIONSHIPS
    gnl3Contained in: [BAC] CH211-80B12 (1) (order this)
    gnl3Encodes: [EST] fb38a04, fc55d07, ibd2914 (order this)
    [cDNA] MGC:123093 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002297 (1) 2074bp
    Genomic GenBank:CR450797 (1) 101488bp
    Select Tool
    Polypeptide UniProtKB:F1QGN5 (1) 561aa
    Sequence Clusters UniGene:76519 (1)
    Sequence Information (all 24)
    OTHER gnl3 GENE PAGES
  • Alliance (1)
  • Gene:321897 (1)
  • VEGA:OTTDARG00000020335 (1)
  • Ensembl(GRCz11):ENSDARG00000006219 (2)
  • ORTHOLOGY for gnl3 (Chr: 11)
    CITATIONS (31)