ZFIN ID: ZDB-GENE-030131-6059
Gene Name: Src homology 2 domain containing transforming protein D, b
Gene Symbol: shdb    Nomenclature History

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Previous Names: shd, si:dkeyp-31e2.2, wu:fb38a12 (1), wu:fi32h10, zgc:153246, zgc:153975, zgc:158798

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have phosphotyrosine residue binding activity. Is expressed in several structures, including nervous system; pectoral fin musculature; segmental plate; solid lens vesicle; and tail bud. Orthologous to human SHD (Src homology 2 domain containing transforming protein D).
Genome Resources: Alliance (1),  Gene:564537 (1),  Ensembl(GRCz11):ENSDARG00000062109 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014192Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16983 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH shdb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH shdb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function phosphotyrosine residue binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA shdb-201 (1)    Ensembl 2383
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM shdb No data available
    MARKER RELATIONSHIPS
    shdb Contained in: [BAC] DKEY-94N12 (1) (order this), DKEYP-31E2 (1)
    shdb Encodes: [EST] eu1101 (1), fb38a12, fi32h10
    [cDNA] MGC:153246 (1), MGC:153975 (1), MGC:158798 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001045077 (1)
    Genomic GenBank:BX470234 (1) 149941 nt
    Select Tool
    Polypeptide UniProtKB:A1L2D2 (1) 391 aa
    Sequence Information (all 41)
    ORTHOLOGY for shdb ( Chr: 22 )
    CITATIONS (27)