ZFIN ID: ZDB-GENE-030131-5987
Gene Name: TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
Gene Symbol: taf5l    Nomenclature History

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Previous Names: fi28g02, wu:fi28g02, zgc:63765

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Predicted to be involved in histone H3 acetylation and positive regulation of transcription by RNA polymerase II. Predicted to localize to nuclear chromatin and transcription factor TFIID complex. Orthologous to human TAF5L (TATA-box binding protein associated factor 5 like).
Genome Resources: Alliance (1),  Gene:334055 (1),  Ensembl(GRCz11):ENSDARG00000025808 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63765]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa19609 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH taf5l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH taf5l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process histone H3 acetylation (more)
    Cellular Component STAGA complex (more)
    Molecular Function promoter-specific chromatin binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA taf5l-201 (1)    Ensembl 2087
    ncRNA taf5l-002 (1)    Ensembl 828
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM taf5l No data available
    MARKER RELATIONSHIPS
    taf5l Contained in: [BAC] CH211-52O18 (1)
    taf5l Encodes: [EST] fi28g02
    [cDNA] MGC:63765 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199852 (1) 2038 nt
    Genomic GenBank:CU467834 (1) 44491 nt
    Select Tool
    Polypeptide UniProtKB:F1QIA7 (1) 601 aa
    Sequence Information (all 11)
    ORTHOLOGY for taf5l ( Chr: 1 )
    CITATIONS (22)