ZFIN ID: ZDB-GENE-030131-587
Gene Name: interleukin enhancer binding factor 3b
Gene Symbol: ilf3b    Nomenclature History

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Previous Names: ilf3, wu:fb37d07, wu:fb94b02, zgc:77030

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have double-stranded RNA binding activity; mRNA 3'-UTR AU-rich region binding activity; and single-stranded RNA binding activity. Predicted to be involved in defense response to virus. Predicted to localize to nucleus. Orthologous to human ILF3 (interleukin enhancer binding factor 3).
Genome Resources: Alliance (1),  Gene:321868 (1),  Ensembl(GRCz11):ENSDARG00000105177 (1)
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138939]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7146385]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-ilf3b
2
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ilf3b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ilf3b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process defense response to virus (more)
Cellular Component cytoplasm (more)
Molecular Function mRNA 3'-UTR AU-rich region binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
aberrant processed transcript ilf3b-205 (1)    Ensembl 801
mRNA ilf3b-201 (1)    Ensembl 780
ilf3b-202 (1)    Ensembl 3305
ilf3b-203 (1)    Ensembl 1360
ilf3b-204 (1)    Ensembl 729
ilf3b-206 (1)    Ensembl 1124
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ilf3b No data available
MARKER RELATIONSHIPS
ilf3b Contained in: [BAC] DKEY-61N16 (1) (order this)
ilf3b Encodes: [EST] fb37d07, fb94b02 (1), IMAGE:7138939 (1), IMAGE:7146385 (1), wz7026
[cDNA] MGC:77030 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_212599 (1) 3292 nt
Genomic GenBank:AL935209 (1) 162012 nt
Select Tool
Polypeptide UniProtKB:A0A0R4IUQ9 (1) 833 aa
Sequence Information (all 34)
ORTHOLOGY for ilf3b ( Chr: 3 )
CITATIONS (27)