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ZIRC
ZFIN ID: ZDB-GENE-030131-5808
Gene Name: ArfGAP with FG repeats 1a
Gene Symbol: agfg1a
Sequence Ontology ID : SO:0001217

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Previous Names: agfg1, hrb (1), wu:fb14f05, wu:fi19d11

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTPase activator activity and metal ion binding activity. Is expressed in intermediate cell mass of mesoderm and ventral mesoderm. Orthologous to human AGFG1 (ArfGAP with FG repeats  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (4 images) from Thisse et al., 2004 [MGC:63481]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35962 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH agfg1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH agfg1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function GTPase activator activity (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA agfg1a-201 (1) 2581
    aberrant processed transcript agfg1a-202 (1) 785
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM agfg1a No data available
    MARKER RELATIONSHIPS
    agfg1a Contained in: [BAC] CH211-158N6 (1) (order this)
    agfg1a Contains: [SNP] rs3728744 (1), rs3728745 (1), rs3728746 (1), rs3728747 (1)
    agfg1a Encodes: [EST] fb14f05 (1), fi19d11
    [cDNA] MGC:63481 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199835 (1) 2545 bp
    Genomic GenBank:CR354553 (1) 143156 bp
    Select Tool
    Polypeptide UniProtKB:F1R9R7 (1) 556 aa
    Sequence Clusters UniGene:1483 (1)
    Sequence Information (all 26)
    ORTHOLOGY for agfg1a ( Chr: 15 )
    CITATIONS (22)