ZFIN ID: ZDB-GENE-030131-5768
Gene Name: zgc:66484
Gene Symbol: zgc:66484    Nomenclature History

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Previous Names: fi17d03, wu:fi17d03

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have polyamine oxidase activity. Predicted to be involved in spermine catabolic process. Is expressed in gut; intestinal bulb; and pharynx.
Genome Resources: Alliance (1),  Gene:327557 (1),  Ensembl(GRCz11):ENSDARG00000030478 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 2 figures (3 images) from Thisse et al., 2004 [MGC:66484]
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17098 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34757 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:66484 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:66484 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Cellular Component cellular_component (more)
    Molecular Function oxidoreductase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR002937 Amine oxidase
    Homologous_superfamily IPR036188 FAD/NAD(P)-binding domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:66484-201 (1)    Ensembl 1016
    zgc:66484-202 (1)    Ensembl 2104
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:66484 No data available
    MARKER RELATIONSHIPS
    zgc:66484 Contained in: [BAC] DKEY-260N18 (1) (order this)
    zgc:66484 Encodes: [EST] fi17d03
    [cDNA] MGC:66484 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199827 (1) 2119 bp
    Genomic GenBank:BX571855 (1) 114407 bp
    Select Tool
    Polypeptide UniProtKB:F1Q7C3 (1) 495 aa
    Sequence Information (all 16)
    ORTHOLOGY for zgc:66484 ( Chr: 9 )
    CITATIONS (18)