ZFIN ID: ZDB-GENE-030131-5725
Gene Name: AT rich interactive domain 1Ab (SWI-like)
Gene Symbol: arid1ab
Sequence Ontology ID : SO:0000704

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Previous Names: fb82h08, fi15b05, im:7160733, si:dkey-180c19.1, wu:fb82h08, wu:fi15b05

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7160733]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arid1ab HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Coffin-Siris syndrome 2 Coffin-Siris syndrome 2 614607
DISEASE ASSOCIATED WITH arid1ab VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process chromatin remodeling (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001606 (1)
  • InterPro:IPR021906 (1)
  • InterPro:IPR030094 (1)
  • InterPro:IPR033388 (1)
  • InterPro:IPR036431 (1)
  • PROSITE:PS51011 (1)
  • Pfam:PF01388 (1)
  • Pfam:PF12031 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arid1ab-001 (1) 6303
    ncRNA arid1ab-002 (1) 475
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arid1ab No data available
    MARKER RELATIONSHIPS
    arid1abContained in: [BAC] DKEY-180C19 (1) (order this)
    arid1abEncodes: [EST] fb82h08, fi15b05, IMAGE:7160733 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021468300 (1)
    Genomic GenBank:CT027837 (1) 195174bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QFG7 (1) 2190aa
    Sequence Clusters UniGene:145049 (1)
    Sequence Information (all 28)
    OTHER arid1ab GENE PAGES
  • Alliance (1)
  • Gene:568161 (1)
  • VEGA:OTTDARG00000023431 (1)
  • Ensembl(GRCz11):ENSDARG00000101891 (1)
  • ORTHOLOGY for arid1ab (Chr: 19)
    CITATIONS (24)