ZFIN ID: ZDB-GENE-030131-5725
Gene Name: AT rich interactive domain 1Ab (SWI-like)
Gene Symbol: arid1ab
Previous Names: fb82h08, fi15b05, im:7160733, si:dkey-180c19.1, wu:fb82h08, wu:fi15b05
Location: Chr: 19 Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7160733]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Mutagen Suppliers
la028032Tg Transgenic Insertion DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa125 Point Mutation ENU
    sa9694 Point Mutation ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11863 Point Mutation ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa13031 Point Mutation ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13632 Point Mutation ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-arid1ab (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH arid1ab HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal dominant non-syndromic intellectual disability Mental retardation, autosomal dominant 14 614607
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chromatin remodeling (more)
    Cellular Component BAF-type complex (more)
    Molecular Function DNA binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001606 (1)
  • InterPro:IPR021906 (1)
  • InterPro:IPR030094 (1)
  • PROSITE:PS51011 (1)
  • Pfam:PF01388 (1)
  • Pfam:PF12031 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arid1ab-001 (1) 6303
    ncRNA arid1ab-002 (1) 475
    GENE PRODUCT DESCRIPTION
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arid1ab No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    arid1abContained in: [BAC] DKEY-180C19 (1) (order this)
    arid1abEncodes: [EST] fb82h08, fi15b05, IMAGE:7160733 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009294131 (1) 8458bp
    Genomic GenBank:CT027837 (1) 195174bp
    Select Tool
    Polypeptide UniProtKB:A5WVV1 (1) 2101aa
    Sequence Clusters UniGene:145049 (1)
    Sequence Information (all 28)
    OTHER arid1ab GENE PAGES
  • Gene:568161 (1)
  • VEGA:OTTDARG00000023431 (1)
  • Ensembl(GRCz10):ENSDARG00000101891 (1)
  • ORTHOLOGY for arid1ab (Chr: 19)
    Species Symbol Chromosome Accession # Evidence
    Human ARID1A 1
  • Gene:8289
  • OMIM:603024
  • HGNC:11110
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Arid1a 4
  • MGI:1935147
  • Gene:93760
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (16)