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ZIRC
ZFIN ID: ZDB-GENE-030131-5725
Gene Name: AT rich interactive domain 1Ab (SWI-like)
Gene Symbol: arid1ab    Nomenclature History

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Previous Names: fb82h08, fi15b05, im:7160733, si:dkey-180c19.1, wu:fb82h08, wu:fi15b05

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to be involved in chromatin remodeling. Predicted to localize to the SWI/SNF complex. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome 2 and neuroblastoma. Orthologous to human ARID1A (AT-rich interaction domain 1A).
Genome Resources: Alliance (1),  Gene:568161 (1),  Ensembl(GRCz11):ENSDARG00000101891 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7160733]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arid1ab HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Coffin-Siris syndrome 2 Alliance Coffin-Siris syndrome 2 614607
DISEASE ASSOCIATED WITH arid1ab VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process chromatin remodeling (more)
Cellular Component brahma complex (more)
Molecular Function DNA binding (more)
GO Terms (all 11)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arid1ab-202 (1)    Ensembl 6303
ncRNA arid1ab-002 (1) 475
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arid1ab No data available
MARKER RELATIONSHIPS
arid1ab Contained in: [BAC] DKEY-180C19 (1) (order this)
arid1ab Encodes: [EST] fb82h08, fi15b05, IMAGE:7160733 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_021468300 (1)
Genomic GenBank:CT027837 (1) 195174 bp
Select Tool
Polypeptide UniProtKB:A0A2R8QFG7 (1) 2190 aa
Sequence Clusters UniGene:145049 (1)
Sequence Information (all 28)
ORTHOLOGY for arid1ab ( Chr: 19 )
CITATIONS (26)