ZFIN ID: ZDB-GENE-030131-5725
Gene Name: AT rich interactive domain 1Ab (SWI-like)
Gene Symbol: arid1ab
Sequence Ontology ID : SO:0000704

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Previous Names: fb82h08, fi15b05, im:7160733, si:dkey-180c19.1, wu:fb82h08, wu:fi15b05

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7160733]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arid1ab HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Coffin-Siris syndrome 2 Coffin-Siris syndrome 2 614607
GENE ONTOLOGY
Ontology GO Term
Biological Process chromatin remodeling (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001606 (1)
  • InterPro:IPR021906 (1)
  • InterPro:IPR030094 (1)
  • InterPro:IPR033388 (1)
  • InterPro:IPR036431 (1)
  • PROSITE:PS51011 (1)
  • Pfam:PF01388 (1)
  • Pfam:PF12031 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arid1ab-001 (1) 6303
    ncRNA arid1ab-002 (1) 475
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arid1ab No data available
    MARKER RELATIONSHIPS
    arid1abContained in: [BAC] DKEY-180C19 (1) (order this)
    arid1abEncodes: [EST] fb82h08, fi15b05, IMAGE:7160733 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021468300 (1)
    Genomic GenBank:CT027837 (1) 195174bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IR17 (1) 2101aa
    Sequence Clusters UniGene:145049 (1)
    Sequence Information (all 27)
    OTHER arid1ab GENE PAGES
  • Alliance (1)
  • Gene:568161 (1)
  • VEGA:OTTDARG00000023431 (1)
  • Ensembl(GRCz10):ENSDARG00000101891 (1)
  • ORTHOLOGY for arid1ab (Chr: 19)
    CITATIONS (24)