ZFIN ID: ZDB-GENE-030131-5640
Gene Name: contactin 5
Gene Symbol: cntn5    Nomenclature History

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Previous Names: fi09g01, wu:fi09g01, zgc:55318

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to be involved in cell adhesion. Predicted to localize to neuron projection. Orthologous to human CNTN5 (contactin 5).
Genome Resources: Alliance (1),  Gene:327429 (1),  Ensembl(GRCz11):ENSDARG00000021584 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17204 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25072 Point Mutation Unknown Premature Stop ENU
    sa36716 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cntn5
    2
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cntn5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cntn5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component anchored component of membrane (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cntn5-201 (1)    Ensembl 1802
    cntn5-204 (1)    Ensembl 1730
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cntn5 No data available
    MARKER RELATIONSHIPS
    cntn5 Contained in: [BAC] CH211-218J6 (1), CH211-255P12 (1)
    cntn5 Encodes: [EST] fi09g01
    [cDNA] MGC:55318 (1), MGC:175080 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199804 (1) 4221 nt
    Genomic GenBank:BX927281 (1) 151835 nt
    Select Tool
    Polypeptide UniProtKB:F1QIL8 (1) 1056 aa
    Sequence Information (all 36)
    ORTHOLOGY for cntn5 ( Chr: 18 )
    CITATIONS (24)