| ZFIN ID: ZDB-GENE-030131-5640 |
| Gene Name: | contactin 5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene Symbol: | cntn5 Nomenclature History |
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Attributions
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| Previous Names: | fi09g01, wu:fi09g01, zgc:55318 | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 18 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to be involved in cell adhesion. Predicted to localize to neuron projection. Orthologous to human CNTN5 (contactin 5). | |||||||||||||
| Genome Resources: | Alliance (1), Gene:327429 (1), Ensembl(GRCz11):ENSDARG00000021584 (2) | |||||||||||||
| High Throughput Expression: | GEO (1) , Expression Atlas (1) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
| Allele | Type | Localization | Consequence | Mutagen | Suppliers |
|---|---|---|---|---|---|
| sa17204 | Point Mutation | Unknown | Premature Stop | ENU |
|
| sa25072 | Point Mutation | Unknown | Premature Stop | ENU | |
| sa36716 | Point Mutation | Unknown | Splice Site | ENU |
|
Sequence Targeting Reagents
| Targeting Reagent | Created Alleles | Publications |
|---|---|---|
| CRISPR1-cntn5 |
|
2 |
GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | cell adhesion (more) |
| Cellular Component | anchored component of membrane (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
cntn5-201
(1)
|
1802 |
Select Tool
|
|
|
cntn5-204
(1)
|
1730 |
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|
| Browsers: UCSC, NCBI, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM cntn5
No data available
MARKER RELATIONSHIPS
| cntn5 Contained in: | [BAC] CH211-218J6 (1), CH211-255P12 (1) |
| cntn5 Encodes: |
[EST]
fi09g01
[cDNA] MGC:55318 (1), MGC:175080 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_199804 (1) | 4221 nt |
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|
| Genomic | GenBank:BX927281 (1) | 151835 nt | |
| Polypeptide | UniProtKB:F1QIL8 (1) | 1056 aa |
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ORTHOLOGY for cntn5 (
Chr:
18
)
CITATIONS (24)