ZFIN ID: ZDB-GENE-030131-5531
Gene Name: coagulation factor V
Gene Symbol: f5
Previous Names: si:bz20i5.3, wu:fd21h06
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (7 images) from Thisse et al., 2005 [eu2423]
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Adult (90d-730d, breeding adult)
  liver, whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13037 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13402 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa13751 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa41467 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH f5 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    cerebrovascular disease {Stroke, ischemic, susceptibility to} 601367
    factor V deficiency Factor V deficiency 227400
    Thrombophilia due to activated protein C resistance 188055
    {Thrombophilia, susceptibility to, due to factor V Leiden} 188055
    {Budd-Chiari syndrome} 600880
    {Pregnancy loss, recurrent, susceptibility to, 1} 614389
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to bacterium (more)
    Molecular Function copper ion binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000421 (1)
  • InterPro:IPR008972 (1)
  • InterPro:IPR008979 (1)
  • InterPro:IPR011707 (1)
  • InterPro:IPR024715 (1)
  • InterPro:IPR029821 (1)
  • InterPro:IPR033138 (1)
  • PROSITE:PS00079 (1)
  • PROSITE:PS01285 (1)
  • PROSITE:PS01286 (1)
  • PROSITE:PS50022 (1)
  • Pfam:PF00754 (1)
  • Pfam:PF07732 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA f5-001 (1) 6438
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM f5 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    f5Contained in: [BAC] RP71-20I5 (order this)
    f5Encodes: [EST] eu2423 (1), fd21h06
    [cDNA] MGC:198429 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007208 (1) 6438bp
    Genomic GenBank:AL590146 (1) 121086bp
    Select Tool
    Polypeptide UniProtKB:Q90X47 (1) 2101aa
    Sequence Clusters UniGene:79290 (1)
    Sequence Information (all 22)
    OTHER f5 GENE PAGES
  • Gene:327320 (1)
  • VEGA:OTTDARG00000001279 (1)
  • Ensembl(GRCz10):ENSDARG00000055705 (1)
  • ORTHOLOGY for f5 (Chr: 9)
    Species Symbol Chromosome Accession # Evidence
    Human F5 1
  • Gene:2153
  • OMIM:612309
  • HGNC:3542
  • Amino acid sequence comparison (1)
    Mouse F5 1
  • MGI:88382
  • Gene:14067
  • Amino acid sequence comparison (1)
    Download Curated Orthology
    CITATIONS (18)