Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-5531
Gene Name: coagulation factor V
Gene Symbol: f5
Previous Names: si:bz20i5.3, wu:fd21h06
Location: Chr: 9   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (7 images) from Thisse et al., 2005 [eu2423]
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Adult (90d-730d, breeding adult)
  liver, whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa13037, sa13402, sa13751
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Factor V deficiency 227400
Thrombophilia due to activated protein C resistance 188055
{Budd-Chiari syndrome} 600880
{Pregnancy loss, recurrent, susceptibility to, 1} 614389
{Stroke, ischemic, susceptibility to} 601367
{Thrombophilia, susceptibility to, due to factor V Leiden} 188055
GENE ONTOLOGY
Ontology GO Term
Biological Process response to bacterium (more)
Molecular Function copper ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000421 (1)
  • InterPro:IPR002355 (1)
  • InterPro:IPR008972 (1)
  • InterPro:IPR008979 (1)
  • InterPro:IPR011707 (1)
  • PROSITE:PS00079 (1)
  • PROSITE:PS01285 (1)
  • PROSITE:PS01286 (1)
  • PROSITE:PS50022 (1)
  • Pfam:PF00754 (1)
  • Pfam:PF07732 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA f5-001 (1) 6438
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM f5 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    f5 Contained in: [BAC] RP71-20I5 (order this)
    f5 Encodes: [EST] eu2423 (1), fd21h06
    [cDNA] MGC:198429 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007208 (1) 6438 bp
    Genomic GenBank:AL590146 (1) 121086 bp
    Select Tool
    Polypeptide UniProtKB:Q90X47 (1) 2101 aa
    Sequence Clusters UniGene:79290 (1)
    Sequence Information (all 22)
    OTHER f5 GENE PAGES
  • Gene:327320 (1)
  • VEGA:OTTDARG00000001279 (1)
  • Ensembl(Zv9):ENSDARG00000055705 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA
    Zebrafish f5 9  
    Human F5 1 (1q23)
  • OMIM:612309
  • Gene:2153
  • Mouse F5 1 ( 71.46 cM)
  • MGI:88382
  • Gene:14067
  • Orthology Details
    CITATIONS (18)