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ZIRC
ZFIN ID: ZDB-GENE-030131-5502
Gene Name: chromobox homolog 2 (Drosophila Pc class)
Gene Symbol: cbx2    Nomenclature History

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Previous Names: pc1 (1), wu:fd20e09, zgc:103563

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to localize to the nucleus. Human ortholog(s) of this gene implicated in 46 XY gonadal dysgenesis. Orthologous to human CBX2 (chromobox 2).
Genome Resources: Alliance (1),  Gene:327291 (1),  Ensembl(GRCz11):ENSDARG00000044938 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103563]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13655 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-cbx2 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cbx2 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    46 XY gonadal dysgenesis Alliance ?46XY sex reversal 5 613080
    DISEASE ASSOCIATED WITH cbx2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component nucleus (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cbx2-201 (1)    Ensembl 2141
    ncRNA cbx2-002 (1) 853
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cbx2 No data available
    MARKER RELATIONSHIPS
    cbx2 Contained in: [BAC] CH73-261G11 (1) (order this), CH211-253B18 (1) (order this)
    cbx2 Encodes: [EST] fd20e09
    [cDNA] MGC:103563 (1) (order this), MGC:192035 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_194373 (1) 2110 bp
    Genomic GenBank:BX539325 (1) 183783 bp
    Select Tool
    Polypeptide UniProtKB:F1Q982 (1) 514 aa
    Sequence Clusters UniGene:78712 (1)
    Sequence Information (all 22)
    ORTHOLOGY for cbx2 ( Chr: 3 )
    CITATIONS (23)