ZFIN ID: ZDB-GENE-030131-5406
Gene Name: si:ch73-15b2.5
Gene Symbol: si:ch73-15b2.5    Nomenclature History

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Previous Names: fd16d01, wu:fd16d01 (1), wu:fi75h08

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have Rho guanyl-nucleotide exchange factor activity. Predicted to be involved in activation of GTPase activity. Predicted to localize to cytoplasm and nucleus.
Genome Resources: Alliance (1),  Gene:558551 (1),  Ensembl(GRCz11):ENSDARG00000079467 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch73-15b2.5 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch73-15b2.5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process activation of GTPase activity (more)
Cellular Component cytoplasm (more)
Molecular Function guanyl-nucleotide exchange factor activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA si:ch73-15b2.5-202 (1)    Ensembl 1931
ncRNA si:ch73-15b2.5-002 (1)    Ensembl 866
si:ch73-15b2.5-003 (1)    Ensembl 394
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM si:ch73-15b2.5 No data available
MARKER RELATIONSHIPS
si:ch73-15b2.5 Contained in: [BAC] CH73-15B2 (1)
si:ch73-15b2.5 Contains: [SNP] rs3727994 (1), rs3727995 (1)
si:ch73-15b2.5 Encodes: [EST] fd16d01, fi75h08
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_681781 (1) 2057 nt
Genomic GenBank:CU463231 (1) 104010 nt
Select Tool
Polypeptide UniProtKB:X1WCT2 (1) 532 aa
Sequence Information (all 15)
ORTHOLOGY for si:ch73-15b2.5 ( Chr: 6 )
CITATIONS (16)