ZFIN ID: ZDB-GENE-030131-5287
Gene Name: sap30-like
Gene Symbol: sap30l
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fa26a11, wu:fc10g12, wu:fe36f07, zgc:77367 (1)

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including histone binding activity, histone deacetylase activity, and phosphatidylinositol phosphate binding activity; involved in heart looping; predicted to  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:77367]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 2 figures from Teittinen et al., 2012
Observed in:
DISEASE ASSOCIATED WITH sap30l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sap30l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process heart looping (more)
Cellular Component histone deacetylase complex (more)
Molecular Function histone binding (more)
GO Terms (all 18)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR024145 (1)
  • InterPro:IPR025717 (1)
  • InterPro:IPR025718 (1)
  • InterPro:IPR038291 (1)
  • Pfam:PF13866 (1)
  • Pfam:PF13867 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sap30l-201 (1) 1953
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sap30l No data available
    MARKER RELATIONSHIPS
    sap30lContained in: [BAC] CH73-162O18 (1) (order this)
    [Fosmid] CH1073-409B12 (1) (order this)
    sap30lEncodes: [EST] fa26a11, fc10g12, fe36f07
    [cDNA] MGC:77367 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214703 (1) 1549bp
    Genomic GenBank:CU469525 (1) 36295bp
    Select Tool
    Polypeptide UniProtKB:Q6NYV5 (1) 178aa
    Sequence Clusters UniGene:75929 (1)
    Sequence Information (all 18)
    OTHER sap30l GENE PAGES
  • Alliance (1)
  • Gene:327079 (1)
  • VEGA:OTTDARG00000042966 (1)
  • Ensembl(GRCz11):ENSDARG00000030213 (2)
  • ORTHOLOGY for sap30l (Chr: 21)
    CITATIONS (21)