ZFIN ID: ZDB-GENE-030131-5286
Gene Name: polymerase (RNA) I polypeptide A
Gene Symbol: polr1a
Sequence Ontology ID : SO:0000704

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Previous Names: fa26a03, sb:cb935, wu:fa26a03

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 3 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2001 [cb935]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  alar plate midbrain region, brain, cerebellum, eye (all 20) expand
Curated Microarray Expression: GEO (1)
PHENOTYPE
Data: 9 figures from 5 publications
Observed in: apoptotic process, blood, brain, central nervous system (all 32) expand
DISEASE ASSOCIATED WITH polr1a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
acrofacial dysostosis Cincinnati type Acrofacial dysostosis, Cincinnati type 616462
GENE ONTOLOGY
Ontology GO Term
Biological Process embryonic viscerocranium morphogenesis (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000722 (1)
  • InterPro:IPR006592 (1)
  • InterPro:IPR007066 (1)
  • InterPro:IPR007080 (1)
  • InterPro:IPR007081 (1)
  • InterPro:IPR007083 (1)
  • InterPro:IPR015699 (1)
  • Pfam:PF00623 (1)
  • Pfam:PF04983 (1)
  • Pfam:PF04997 (1)
  • Pfam:PF04998 (1)
  • Pfam:PF05000 (1)
  • EC:2.7.7.6 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA polr1a-001 (1) 5286
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM polr1a No data available
    MARKER RELATIONSHIPS
    polr1aContained in: [BAC] CH73-87E17 (1) (order this), CH211-2M15 (1) (order this)
    polr1aEncodes: [EST] cb935 (1) (order this), fa26a03
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001922804 (1)
    Genomic GenBank:AL929267 (1) 175892bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4I9V4 (1) 1693aa
    Sequence Clusters UniGene:12641 (1)
    Sequence Information (all 32)
    OTHER polr1a GENE PAGES
  • Alliance (1)
  • Gene:327078 (1)
  • VEGA:OTTDARG00000020893 (1)
  • Ensembl(GRCz10):ENSDARG00000098375 (1)
  • ORTHOLOGY for polr1a (Chr: 14)
    CITATIONS (30)