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ZIRC
ZFIN ID: ZDB-GENE-030131-5278
Gene Name: PHD finger protein 6
Gene Symbol: phf6
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fa22g03, zgc:55403

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity. Human ortholog(s) of this gene implicated in Borjeson-Forssman-Lehmann syndrome. Orthologous to human PHF6 (PHD finger protein 6).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55403]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7140111]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la018958Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13009 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH phf6 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Borjeson-Forssman-Lehmann syndrome Borjeson-Forssman-Lehmann syndrome 301900
    DISEASE ASSOCIATED WITH phf6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 1)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA phf6-201 (1) 1920
    phf6-202 (1) 884
    phf6-204 (1) 810
    phf6-205 (1) 926
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM phf6 No data available
    MARKER RELATIONSHIPS
    phf6Contained in: [BAC] DKEY-100E19 (1) (order this)
    phf6Encodes: [EST] fa22g03, IMAGE:7140111 (1) (order this)
    [cDNA] MGC:55403 (1) (order this), MGC:191938 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199765 (1) 1802bp
    Genomic GenBank:BX511227 (1) 262038bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QPB3 (1) 363aa
    Sequence Clusters UniGene:75858 (1)
    Sequence Information (all 25)
    ORTHOLOGY for phf6 (Chr: 14)
    CITATIONS (23)