ZFIN ID: ZDB-GENE-030131-5234
Gene Name: ADP-ribosylation factor 2b
Gene Symbol: arf2b    Nomenclature History

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Previous Names: arf12b, arf1l, fa19d09, wu:fa19d09, wu:fb19d05

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have GTP binding activity. Predicted to be involved in Golgi to plasma membrane transport and intracellular protein transport. Predicted to localize to the Golgi apparatus and plasma membrane. Human ortholog(s) of this gene implicated in periventricular nodular heterotopia. Orthologous to human ARF1 (ADP ribosylation factor 1).
Genome Resources: Alliance (1),  Gene:327026 (1), 
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56309]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arf2b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH arf2b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein phosphorylation (more)
Cellular Component cytoplasm (more)
Molecular Function ATP binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Active_site IPR008271 Serine/threonine-protein kinase, active site
Domain IPR000719 Protein kinase domain
Domain IPR005225 Small GTP-binding protein domain
Family IPR006689 Small GTPase superfamily, ARF/SAR type
Homologous_superfamily IPR011009 Protein kinase-like domain superfamily
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arf2b-201 (1)    Ensembl 1525
arf2b-202 (1)    Ensembl 538
arf2b-203 (1)    Ensembl 870
arf2b-204 (1)    Ensembl 812
Browsers: NCBI
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arf2b No data available
MARKER RELATIONSHIPS
arf2b Contained in: [BAC] CH211-253B1 (1)
arf2b Encodes: [EST] fa19d09, fb19d05
[cDNA] MGC:56309 (1), MGC:77783 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_201480 (1) 1513 nt
Genomic GenBank:CT737151 (1) 153069 nt
Select Tool
Polypeptide UniProtKB:F1QV75 (1) 783 aa
Sequence Information (all 18)
ORTHOLOGY for arf2b ( Chr: 24 )
CITATIONS (21)