ZFIN ID: ZDB-GENE-030131-5086
Gene Name: golgi-associated PDZ and coiled-coil motif containing
Gene Symbol: gopc    Nomenclature History

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Previous Names: fe38f01, wu:fe38f01, zgc:56254, zgc:65853

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have ion channel binding activity. Predicted to be involved in cytoplasmic sequestering of CFTR protein and negative regulation of protein localization to cell surface. Predicted to localize to Golgi apparatus; membrane; and trans-Golgi network transport vesicle. Orthologous to human GOPC (golgi associated PDZ and coiled-coil motif containing).
Genome Resources: Alliance (1),  Gene:326887 (1),  Ensembl(GRCz11):ENSDARG00000023117 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56254]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH gopc HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH gopc VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cytoplasmic sequestering of CFTR protein (more)
Cellular Component Golgi apparatus (more)
Molecular Function ion channel binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA gopc-202 (1)    Ensembl 2153
ncRNA gopc-002 (1)    Ensembl 728
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM gopc No data available
MARKER RELATIONSHIPS
gopc Contained in: [BAC] CH211-102B16 (1), CH211-197O9 (1)
gopc Encodes: [EST] fe38f01
[cDNA] MGC:56254 (1), MGC:65853 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200557 (1) 2137 nt
Genomic GenBank:CU138502 (1) 158947 nt
Select Tool
Polypeptide UniProtKB:Q6PHG0 (1) 455 aa
Sequence Information (all 16)
ORTHOLOGY for gopc ( Chr: 20 )
CITATIONS (20)