ZFIN ID: ZDB-GENE-030131-5007
Gene Name: coiled-coil domain containing 28A
Gene Symbol: ccdc28a
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fe24b05, zgc:63962

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63962]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027852Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ccdc28a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ccdc28a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of Rho protein signal transduction (more)
    Cellular Component cellular_component (more)
    Molecular Function Rho guanyl-nucleotide exchange factor activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000219 (1)
  • InterPro:IPR001810 (1)
  • InterPro:IPR007858 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR025271 (1)
  • InterPro:IPR025592 (1)
  • InterPro:IPR035899 (1)
  • InterPro:IPR036047 (1)
  • PROSITE:PS50010 (1)
  • Pfam:PF00621 (1)
  • Pfam:PF00646 (1)
  • Pfam:PF05186 (1)
  • Pfam:PF13270 (1)
  • Pfam:PF14252 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ccdc28a-001 (1) 1279
    ccdc28a-002 (1) 724
    ccdc28a-003 (1) 731
    ncRNA ccdc28a-004 (1) 823
    mRNA ccdc28a-005 (1) 735
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ccdc28a No data available
    MARKER RELATIONSHIPS
    ccdc28aContained in: [BAC] CH211-132F19 (1) (order this)
    ccdc28aEncodes: [EST] fe24b05, wz1078 (1)
    [cDNA] MGC:63962 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199748 (1) 1263bp
    Genomic GenBank:BX323819 (1) 178951bp
    Select Tool
    Polypeptide UniProtKB:F1QUJ5 (1) 956aa
    Sequence Clusters UniGene:80134 (1)
    Sequence Information (all 18)
    OTHER ccdc28a GENE PAGES
  • Alliance (1)
  • Gene:326808 (1)
  • VEGA:OTTDARG00000022836 (1)
  • Ensembl(GRCz11):ENSDARG00000022983 (2)
  • ORTHOLOGY for ccdc28a (Chr: 17)
    CITATIONS (21)