ZFIN ID: ZDB-GENE-030131-4945
Gene Name: chromobox homolog 1a (HP1 beta homolog Drosophila)
Gene Symbol: cbx1a    Nomenclature History

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Previous Names: cbx1 (1), wu:fe14b09, zgc:55739

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to localize to nucleus. Is expressed in brain and retina. Orthologous to human CBX1 (chromobox 1).
Genome Resources: Alliance (1),  Gene:326746 (1),  Ensembl(GRCz11):ENSDARG00000004189 (1)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55739]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015138Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la024031Tg Transgenic Insertion Unknown Unknown DNA
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-cbx1a N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cbx1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cbx1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component nucleus (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cbx1a-201 (1)    Ensembl 2448
    cbx1a-202 (1)    Ensembl 263
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cbx1a No data available
    MARKER RELATIONSHIPS
    cbx1a Contained in: [BAC] CH211-246I5 (1)
    cbx1a Encodes: [EST] fe14b09
    [cDNA] MGC:55739 (1), MGC:86873 (1), MGC:192194 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199746 (1) 2438 nt
    Genomic GenBank:CR450718 (1) 151291 nt
    Select Tool
    Polypeptide UniProtKB:F1QM86 (1) 212 aa
    Sequence Information (all 21)
    ORTHOLOGY for cbx1a ( Chr: 3 )
    CITATIONS (28)