ZFIN ID: ZDB-GENE-030131-4867
Gene Name: SS18 subunit of BAF chromatin remodeling complex
Gene Symbol: ss18
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: wu:fe02e04, zgc:55812

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55812]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39745 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ss18 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Sarcoma, synovial
    DISEASE ASSOCIATED WITH ss18 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function transcription coactivator activity (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007726 (1)
  • Pfam:PF05030 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ss18-001 (1) 2082
    ss18-002 (1) 1164
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ss18 No data available
    MARKER RELATIONSHIPS
    ss18Contained in: [BAC] CH73-305A18 (1) (order this)
    ss18Encodes: [EST] fe02e04
    [cDNA] MGC:55812 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199744 (1) 2051bp
    Genomic GenBank:FP101911 (1) 89944bp
    Select Tool
    Polypeptide UniProtKB:Q802V1 (1) 368aa
    Sequence Clusters UniGene:20155 (1)
    Sequence Information (all 17)
    OTHER ss18 GENE PAGES
  • Alliance (1)
  • Gene:326668 (1)
  • VEGA:OTTDARG00000040816 (1)
  • Ensembl(GRCz11):ENSDARG00000002970 (2)
  • ORTHOLOGY for ss18 (Chr: 2)
    CITATIONS (17)