ZFIN ID: ZDB-GENE-030131-4867
Gene Name: synovial sarcoma translocation, chromosome 18 (H. sapiens)
Gene Symbol: ss18
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fe02e04, zgc:55812

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Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55812]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39745 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ss18 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Sarcoma, synovial
DISEASE ASSOCIATED WITH ss18 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component cellular_component (more)
Molecular Function transcription coactivator activity (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007726 (1)
  • Pfam:PF05030 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ss18-001 (1) 2082
    ss18-002 (1) 1164
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ss18 No data available
    MARKER RELATIONSHIPS
    ss18Contained in: [BAC] CH73-305A18 (1) (order this)
    ss18Encodes: [EST] fe02e04
    [cDNA] MGC:55812 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199744 (1) 2051bp
    Genomic GenBank:FP101911 (1) 89944bp
    Select Tool
    Polypeptide UniProtKB:Q802V1 (1) 368aa
    Sequence Clusters UniGene:20155 (1)
    Sequence Information (all 17)
    OTHER ss18 GENE PAGES
  • Alliance (1)
  • Gene:326668 (1)
  • VEGA:OTTDARG00000040816 (1)
  • Ensembl(GRCz11):ENSDARG00000002970 (2)
  • ORTHOLOGY for ss18 (Chr: 2)
    CITATIONS (17)