ZFIN ID: ZDB-GENE-030131-4783
Gene Name: secernin 3
Gene Symbol: scrn3    Nomenclature History

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Previous Names: wu:fd60b06, zgc:55430

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have dipeptidase activity. Predicted to be involved in proteolysis. Orthologous to human SCRN3 (secernin 3).
Genome Resources: Alliance (1),  Gene:326058 (1),  Ensembl(GRCz11):ENSDARG00000016611 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55430]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31697 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH scrn3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH scrn3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Molecular Function dipeptidase activity (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA scrn3-201 (1)    Ensembl 2397
    scrn3-202 (1)    Ensembl 792
    ncRNA scrn3-002 (1)    Ensembl 903
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM scrn3 No data available
    MARKER RELATIONSHIPS
    scrn3 Contained in: [BAC] CH73-167C12 (1)
    scrn3 Encodes: [EST] fd60b06
    [cDNA] MGC:55430 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199738 (1) 1718 nt
    Genomic GenBank:FP236259 (1) 73688 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8RLE3 (1) 438 aa
    Sequence Information (all 16)
    ORTHOLOGY for scrn3 ( Chr: 9 )
    CITATIONS (20)