Gene

nup153

ID

ZDB-GENE-030131-4581

Name

nucleoporin 153

Symbol

nup153 Nomenclature History

Previous Names

fd23d09
si:ch211-153f2.5
wu:fd23d09 (1)

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have nuclear localization sequence binding activity. Involved in angiogenesis. Predicted to localize to nuclear pore central transport channel and nuclear pore nuclear basket. Orthologous to human NUP153 (nucleoporin 153).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Kim et al., 2015
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nup153 Human Ortholog

No data available

Associated With nup153 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001876	Zinc finger, RanBP2-type
Domain	IPR013913	Nucleoporin Nup153, N-terminal
Family	IPR026054	Nuclear pore complex protein
Homologous_superfamily	IPR036443	Zinc finger, RanBP2-type superfamily

Domain Details Per Protein

Protein	Length	Nuclear pore complex protein	Nucleoporin Nup153, N-terminal	Zinc finger, RanBP2-type	Zinc finger, RanBP2-type superfamily
UniProtKB:A0A8M3AVV7 InterPro	1435
UniProtKB:A0A8M2B6L1 InterPro	1422
UniProtKB:A0A8M3ASW6 InterPro	1321
UniProtKB:A0A8M9PB38 InterPro	1389
UniProtKB:A0A8N7TFJ5 InterPro	1435
UniProtKB:A0A0R4IVZ0 InterPro	1436

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	nup153-201 (1) Ensembl	Havana	717 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	nup153-202 (1) Ensembl	Havana	578 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	nup153-203 (1) Ensembl	Havana	5513 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	nup153-005 (1) Ensembl	Havana	926 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	nup153-006 (1) Ensembl	Havana	588 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations