ZFIN ID: ZDB-GENE-030131-441
Gene Name: junctional adhesion molecule 3b
Gene Symbol: jam3b
Sequence Ontology ID : SO:0000704

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Previous Names: jam3, jamc.1 (1), jamc (1), sr:nyz155, wu:fb30h11 (1), wu:fc08c06 (1), wu:fc13e04 (1), wu:fc25g11 (1)

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in myoblast fusion; predicted to localize to the integral component of membrane; orthologous to human JAM3 (junctional adhesion molecule 3).
GENE EXPRESSION
All Expression Data: 14 figures from 5 publications
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2008 [cssl:d123]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37 Point Mutation Unknown Missense ENU
sa14980 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16151 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tpl7Gt Transgenic Insertion Unknown Unknown DNA
    Targeting reagents:
    PHENOTYPE
    Data: 4 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH jam3b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Hemorrhagic destruction of the brain, subependymal calcification, and cataracts 613730
    DISEASE ASSOCIATED WITH jam3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process myoblast fusion (more)
    Cellular Component integral component of membrane (more)
    Molecular Function protein binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003598 (1)
  • InterPro:IPR003599 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR013106 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR036179 (1)
  • PROSITE:PS50835 (1)
  • Pfam:PF07686 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA jam3b-001 (1) 4865
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM jam3b No data available
    MARKER RELATIONSHIPS
    jam3bContained in: [BAC] CH211-8G12 (1) (order this), DKEY-106J17 (1) (order this)
    jam3bContains: [SNP] rs3728175 (1), rs3729118 (1), rs3729401 (1), rs3729449 (1), rs3729450 (1)
    jam3bEncodes: [EST] fb30h11, fc08c06, fc13e04, fc25g11, nyz155
    [cDNA] cssl:d123 (1) (order this), cssl:d178 (1), MGC:163100 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082863 (1) 1793bp
    Genomic GenBank:BX470244 (1) 200867bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QYD7 (1) 333aa
    Sequence Clusters UniGene:76178 (1)
    Sequence Information (all 27)
    OTHER jam3b GENE PAGES
  • Alliance (1)
  • Gene:569217 (1)
  • VEGA:OTTDARG00000028225 (1)
  • Ensembl(GRCz11):ENSDARG00000061794 (2)
  • ORTHOLOGY for jam3b (Chr: 21)
    CITATIONS (35)