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ZIRC
ZFIN ID: ZDB-GENE-030131-4343
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Gene Name: ribosomal protein L27
Gene Symbol: rpl27
Sequence Ontology ID : SO:0000704

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Previous Names: fc93a08, wu:fc93a08, zgc:56171 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of ribosome. Involved in erythrocyte differentiation. Predicted to localize to the cytoplasmic side of rough endoplasmic reticulum membrane and cytosolic  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56171]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: Fig. 3 from Wang et al., 2015
Observed in:
DISEASE ASSOCIATED WITH rpl27 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
?Diamond-Blackfan anemia 16 617408
DISEASE ASSOCIATED WITH rpl27 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process erythrocyte differentiation (more)
Cellular Component cytoplasmic side of rough endoplasmic reticulum membrane (more)
Molecular Function structural constituent of ribosome (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001141 (1)
  • InterPro:IPR005824 (1)
  • InterPro:IPR008991 (1)
  • InterPro:IPR018262 (1)
  • InterPro:IPR038655 (1)
  • InterPro:IPR041991 (1)
    		•
  • PROSITE:PS01107 (1)
    		•
  • Pfam:PF00467 (1)
  • Pfam:PF01777 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpl27-201 (1) 487
    Select Tool
    rpl27-202 (1) 682
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rpl27 No data available
    MARKER RELATIONSHIPS
    rpl27Contained in: [BAC] DKEY-151M15 (1) (order this)
    rpl27Encodes: [EST] fc93a08
    [cDNA] MGC:56171 (1) (order this), MGC:191398 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199724 (1) 510bp
    Select Tool
    Genomic GenBank:BX901883 (1) 241961bp Blast at MegaBLAST
    Polypeptide UniProtKB:B2GP62 (1) 136aa
    Select Tool
    Sequence Clusters UniGene:75716 (1)
    Sequence Information (all 17)
    OTHER rpl27 GENE PAGES
  • Alliance (1)
  • Gene:325618 (1)
  • VEGA:OTTDARG00000019940 (1)
  • Ensembl(GRCz11):ENSDARG00000015128 (2)
    • ORTHOLOGY for rpl27 (Chr: 3)
    CITATIONS (27)