ZFIN ID: ZDB-GENE-030131-4311
Gene Name: cytohesin 1b
Gene Symbol: cyth1b    Nomenclature History

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Previous Names: fc89h04, wu:fc89h04, zgc:73134 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have ARF guanyl-nucleotide exchange factor activity. Involved in epiboly involved in gastrulation with mouth forming second. Is expressed in blastoderm; intermediate cell mass of mesoderm; neural crest; and polster. Orthologous to human CYTH1 (cytohesin 1).
Genome Resources: Alliance (1),  Gene:325586 (1),  Ensembl(GRCz11):ENSDARG00000021488 (2)
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:73134]
Wild-type Stages, Structures: Blastula:Sphere (4.0h-4.33h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16913 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35345 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-cyth1b N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cyth1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cyth1b VIA EXPERIMENTAL MODELS No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cyth1b-201 (1)    Ensembl 2263
    cyth1b-202 (1)    Ensembl 602
    cyth1b-204 (1)    Ensembl 615
    ncRNA cyth1b-004 (1)    Ensembl 806
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cyth1b No data available
    MARKER RELATIONSHIPS
    cyth1b Contained in: [BAC] CH73-331H12 (1)
    [Fosmid] CH1073-173B15 (1), CH1073-231I1 (1), CH1073-271O8 (1)
    cyth1b Encodes: [EST] fc89h04
    [cDNA] MGC:73134 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_199722 (1) 2262 nt
    Genomic GenBank:CU695075 (1) 86193 nt
    Select Tool
    Polypeptide UniProtKB:F1R9I9 (1) 399 aa
    Sequence Information (all 25)
    ORTHOLOGY for cyth1b ( Chr: 12 )
    CITATIONS (23)