ZFIN ID: ZDB-GENE-030131-426
Gene Name: atrophin 1
Gene Symbol: atn1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fb30f09, si:ch211-57k11.4, wu:fb30f09

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity, RNA polymerase II transcription factor binding activity, and transcription corepressor activity; predicted to localize to the nucleus; orthologous to human  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa472 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42760 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atn1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    dentatorubral-pallidoluysian atrophy Dentatorubro-pallidoluysian atrophy 125370
    DISEASE ASSOCIATED WITH atn1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002951 (1)
  • Pfam:PF03154 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atn1-201 (1) 5812
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atn1 No data available
    MARKER RELATIONSHIPS
    atn1Contained in: [BAC] CH211-57K11 (1) (order this)
    atn1Encodes: [EST] fb30f09
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005158189 (1)
    Genomic GenBank:BX511250 (1) 189081bp
    Select Tool
    Polypeptide UniProtKB:F6PDP0 (1) 1666aa
    Sequence Clusters UniGene:118578 (1)
    Sequence Information (all 33)
    OTHER atn1 GENE PAGES
  • Alliance (1)
  • Gene:321707 (1)
  • VEGA:OTTDARG00000019298 (1)
  • Ensembl(GRCz11):ENSDARG00000092067 (2)
  • ORTHOLOGY for atn1 (Chr: 16)
    CITATIONS (16)