ZFIN ID: ZDB-GENE-030131-4089
Gene Name: prolyl 4-hydroxylase, alpha polypeptide I b
Gene Symbol: p4ha1b
Sequence Ontology ID : SO:0000704

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Previous Names: p4ha1, wu:fc69d06, wu:fi27h11, zgc:56058

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to procollagen-proline 4-dioxygenase activity; predicted to be involved in peptidyl-proline hydroxylation to 4-hydroxy-L-proline; predicted to localize to the endoplasmic  ...
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7144629]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019972Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019973Tg Transgenic Insertion Unknown Unknown DNA
    la019974Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10102 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14912 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH p4ha1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH p4ha1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function dioxygenase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005123 (1)
  • InterPro:IPR006620 (1)
  • InterPro:IPR011990 (1)
  • InterPro:IPR013026 (1)
  • InterPro:IPR013547 (1)
  • InterPro:IPR019734 (1)
  • PROSITE:PS50005 (1)
  • PROSITE:PS50293 (1)
  • PROSITE:PS51471 (1)
  • Pfam:PF08336 (1)
  • Pfam:PF13640 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA p4ha1b-201 (1) 2371
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM p4ha1b No data available
    MARKER RELATIONSHIPS
    p4ha1bContained in: [BAC] CH211-248A14 (1) (order this)
    p4ha1bEncodes: [EST] fi27h11 (1), IMAGE:7144629 (1) (order this)
    [cDNA] MGC:56058 (1) (order this)
    p4ha1bHas Artifact: [EST] fc69d06
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214691 (1) 2312bp
    Genomic RefSeq:NW_018394981 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8RN68 (1) 536aa
    Sequence Clusters UniGene:3932 (1)
    Sequence Information (all 25)
    OTHER p4ha1b GENE PAGES
  • Alliance (1)
  • Gene:100003675 (1)
  • VEGA:OTTDARG00000020327 (1)
  • ORTHOLOGY for p4ha1b (Chr: 17)
    CITATIONS (25)