ZFIN ID: ZDB-GENE-030131-408
Gene Name: ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
Gene Symbol: ube2e3    Nomenclature History

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Previous Names: wu:fb26h04, zgc:76906 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have ubiquitin conjugating enzyme activity. Predicted to be involved in protein K11-linked ubiquitination; protein K48-linked ubiquitination; and protein K63-linked ubiquitination. Predicted to localize to nucleus. Orthologous to human UBE2E3 (ubiquitin conjugating enzyme E2 E3).
Genome Resources: Alliance (1),  Gene:321689 (1),  Ensembl(GRCz11):ENSDARG00000012244 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55923]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027007Tg Transgenic Insertion Unknown Unknown DNA
sa17991 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ube2e3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ube2e3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein K11-linked ubiquitination (more)
    Cellular Component nucleus (more)
    Molecular Function ATP binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ube2e3-201 (1)    Ensembl 1677
    ncRNA ube2e3-002 (1)    Ensembl 809
    ube2e3-003 (1)    Ensembl 682
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ube2e3 No data available
    MARKER RELATIONSHIPS
    ube2e3 Contained in: [BAC] CH211-143I6 (1), DKEY-169N7 (1) (order this)
    ube2e3 Encodes: [EST] fb26h04
    [cDNA] MGC:55923 (1), MGC:76906 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200921 (1) 1580 nt
    Genomic GenBank:BX470133 (1) 178929 nt
    Select Tool
    Polypeptide UniProtKB:B0S6A7 (1) 209 aa
    Sequence Information (all 16)
    ORTHOLOGY for ube2e3 ( Chr: 9 )
    CITATIONS (25)