ZFIN ID: ZDB-GENE-030131-4022
Gene Name: GREB1 like retinoic acid receptor coactivator
Gene Symbol: greb1l
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fc65f09, si:dkey-203o21.1, si:dkey-264l15.1, wu:fc55e03, wu:fc65f09 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 6 figures from 3 publications
Wild-type Stages, Structures: Gastrula:75%-epiboly (8.0h-9.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
rdu1000 Small Deletion Exon 8 Unknown CRISPR
sa1260 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1657 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa5124 Point Mutation Unknown Premature Stop ENU
    sa14368 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16374 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16854 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17608 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19691 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25771 Point Mutation Unknown Premature Stop ENU
    sa32856 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 6 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH greb1l HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Renal hypodysplasia/aplasia 3 617805
    DISEASE ASSOCIATED WITH greb1l VIA EXPERIMENTAL MODELS
    Human Disease Fish Conditions Citations
    renal agenesis greb1lrdu1000/rdu1000 standard conditions Sanna-Cherchi et al., 2017
    EKW + MO2-greb1l standard conditions Sanna-Cherchi et al., 2017
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process kidney development (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR024840 (1)
  • InterPro:IPR028422 (1)
  • Pfam:PF15782 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA greb1l-001 (1) 9009
    ncRNA greb1l-002 (1) 851
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM greb1l No data available
    MARKER RELATIONSHIPS
    greb1lContained in: [BAC] CH73-337F15 (1) (order this), DKEY-203O21 (1) (order this), DKEY-264L15 (1) (order this)
    greb1lEncodes: [EST] fc55e03, fc65f09, wz13009
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001362307 (1)
    Genomic GenBank:CT573467 (1) 102014bp
    Select Tool
    Polypeptide UniProtKB:B8JKP6 (1) 1942aa
    Sequence Clusters UniGene:79031 (1)
    Sequence Information (all 33)
    OTHER greb1l GENE PAGES
  • Alliance (1)
  • Gene:100005373 (1)
  • VEGA:OTTDARG00000026942 (1)
  • Ensembl(GRCz11):ENSDARG00000039196 (2)
  • ORTHOLOGY for greb1l (Chr: 2)
    CITATIONS (26)