ZFIN is now using GRCz12tu for Genomic Data
Gene
ddx31
- ID
- ZDB-GENE-030131-3973
- Name
- DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
- Symbol
- ddx31 Nomenclature History
- Previous Names
-
- fc62b08
- si:ch211-89p1.3
- wu:fc62b08
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in ribosome biogenesis. Predicted to be active in nucleus. Orthologous to human DDX31 (DEAD-box helicase 31).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR000629 | ATP-dependent RNA helicase DEAD-box, conserved site |
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR011545 | DEAD/DEAH box helicase domain |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR014014 | RNA helicase, DEAD-box type, Q motif |
| Domain | IPR025313 | ATP-dependent rRNA helicase SPB4-like, C-terminal extension |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Additional Resources | Length | ATP-dependent RNA helicase DEAD-box, conserved site | ATP-dependent rRNA helicase SPB4-like, C-terminal extension | DEAD/DEAH box helicase domain | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | RNA helicase, DEAD-box type, Q motif |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PQY5 | InterPro | 739 | |||||||
| UniProtKB:A2BFD2 | InterPro | 739 | |||||||
| UniProtKB:A0A8N7TAG0 | InterPro | 739 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers