ZFIN ID: ZDB-GENE-030131-3973
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
Gene Symbol: ddx31    Nomenclature History

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Previous Names: fc62b08, si:ch211-89p1.3, wu:fc62b08

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have RNA binding activity and RNA helicase activity. Predicted to be involved in ribosome biogenesis. Predicted to localize to the nucleus. Orthologous to human DDX31 (DEAD-box helicase 31).
Genome Resources: Alliance (1),  Gene:325248 (1),  Ensembl(GRCz11):ENSDARG00000035507 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ddx31 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ddx31 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ribosome biogenesis (more)
Cellular Component nucleus (more)
Molecular Function ATP binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Conserved_site IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site
Domain IPR001650 Helicase, C-terminal
Domain IPR011545 DEAD/DEAH box helicase domain
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR014014 RNA helicase, DEAD-box type, Q motif
Domain IPR025313 Domain of unknown function DUF4217
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ddx31-201 (1)    Ensembl 690
ddx31-202 (1)    Ensembl 2780
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ddx31 No data available
MARKER RELATIONSHIPS
ddx31 Contained in: [BAC] CH211-215C18 (1)
ddx31 Encodes: [EST] fc62b08
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_021471609 (1)
Genomic GenBank:BX276128 (1) 176461 bp
Select Tool
Polypeptide UniProtKB:A2BFD2 (1) 739 aa
Sequence Information (all 25)
ORTHOLOGY for ddx31 ( Chr: 5 )
CITATIONS (19)