ZFIN ID: ZDB-GENE-030131-3789
Gene Name: THO complex 5
Gene Symbol: thoc5
Sequence Ontology ID : SO:0000704

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Previous Names: fc54b09, wu:fc54b09, zgc:56190, zgc:76912

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have mRNA binding activity; predicted to be involved in mRNA export from nucleus and positive regulation of DNA-templated transcription, elongation; predicted to localize to the THO  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56190]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023359Tg Transgenic Insertion Unknown Unknown DNA
sa37987 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37988 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH thoc5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH thoc5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell differentiation (more)
    Cellular Component cytoplasm (more)
    Molecular Function RNA binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019163 (1)
  • Pfam:PF09766 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA thoc5-001 (1) 2348
    thoc5-002 (1) 677
    thoc5-003 (1) 872
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM thoc5 No data available
    MARKER RELATIONSHIPS
    thoc5Contained in: [BAC] CH211-43O9 (1) (order this)
    thoc5Encodes: [EST] fc54b09
    [cDNA] MGC:56190 (1) (order this), MGC:76912 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212692 (1) 2370bp
    Genomic GenBank:CU138509 (1) 153571bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QR48 (1) 705aa
    Sequence Clusters UniGene:2250 (1)
    Sequence Information (all 25)
    OTHER thoc5 GENE PAGES
  • Alliance (1)
  • Gene:325064 (1)
  • VEGA:OTTDARG00000039211 (1)
  • Ensembl(GRCz11):ENSDARG00000038290 (2)
  • ORTHOLOGY for thoc5 (Chr: 25)
    CITATIONS (23)