ZFIN ID: ZDB-GENE-030131-378
Gene Name: zinc finger RNA binding protein
Gene Symbol: zfr    Nomenclature History

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Previous Name: wu:fb25b08

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have double-stranded RNA binding activity and single-stranded RNA binding activity. Predicted to be involved in multicellular organism development. Predicted to localize to nucleus. Orthologous to human ZFR (zinc finger RNA binding protein).
Genome Resources: Alliance (1),  Gene:321659 (1),  Ensembl(GRCz11):ENSDARG00000027109 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66235]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7144358]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zfr HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zfr VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process multicellular organism development (more)
Cellular Component cytoplasm (more)
Molecular Function DNA binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA zfr-201 (1)    Ensembl 4669
ncRNA zfr-002 (1)    Ensembl 1738
zfr-003 (1)    Ensembl 824
zfr-004 (1)    Ensembl 448
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM zfr No data available
MARKER RELATIONSHIPS
zfr Contained in: [BAC] DKEY-207E22 (1) (order this)
zfr Encodes: [EST] fb25b08, IMAGE:7144358 (1)
[cDNA] MGC:66235 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_199558 (1) 4690 nt
Genomic GenBank:BX470118 (1) 223990 nt Blast at MegaBLAST
Polypeptide UniProtKB:A2BGG2 (1) 1074 aa
Sequence Information (all 19)
ORTHOLOGY for zfr ( Chr: 5 )
CITATIONS (28)