ZFIN ID: ZDB-GENE-030131-378
Gene Name: zinc finger RNA binding protein
Gene Symbol: zfr
Sequence Ontology ID : SO:0000704

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Previous Name: wu:fb25b08

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66235]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7144358]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015687Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15440 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa30863 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33675 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40524 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40525 Point Mutation Unknown Splice Site, Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40526 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zfr HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component cytoplasm (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003604 (1)
  • InterPro:IPR006561 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS51703 (1)
  • Pfam:PF07528 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zfr-001 (1) 4669
    ncRNA zfr-002 (1) 1738
    zfr-003 (1) 824
    zfr-004 (1) 448
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zfr No data available
    MARKER RELATIONSHIPS
    zfrContained in: [BAC] DKEY-207E22 (1) (order this)
    zfrEncodes: [EST] fb25b08, IMAGE:7144358 (1) (order this)
    [cDNA] MGC:66235 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199558 (1) 4690bp
    Genomic GenBank:BX470118 (1) 223990bp Blast at MegaBLAST
    Polypeptide UniProtKB:A2BGG2 (1) 1074aa
    Sequence Clusters UniGene:26724 (1)
    Sequence Information (all 18)
    OTHER zfr GENE PAGES
  • Alliance (1)
  • Gene:321659 (1)
  • VEGA:OTTDARG00000018565 (1)
  • ORTHOLOGY for zfr (Chr: 5)
    CITATIONS (24)