ZFIN ID: ZDB-GENE-030131-3544
Gene Name: general transcription factor IIB
Gene Symbol: gtf2b
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fc44c11, zgc:66258

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have TBP-class protein binding activity and metal ion binding activity; predicted to be involved in regulation of transcription, DNA-templated and transcription preinitiation complex  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66258]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH gtf2b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH gtf2b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Molecular Function metal ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000812 (1)
  • InterPro:IPR013137 (1)
  • InterPro:IPR013150 (1)
  • InterPro:IPR013763 (1)
  • InterPro:IPR023486 (1)
  • InterPro:IPR036915 (1)
  • PROSITE:PS00782 (1)
  • PROSITE:PS51134 (1)
  • Pfam:PF00382 (1)
  • Pfam:PF08271 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gtf2b-001 (1) 1609
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gtf2b
    MARKER RELATIONSHIPS
    gtf2bContained in: [BAC] CH211-83F14 (1) (order this)
    gtf2bEncodes: [EST] fc44c11
    [cDNA] MGC:66258 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199697 (1) 1586bp
    Genomic GenBank:BX927353 (1) 94558bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IRB5 (1) 316aa
    Sequence Clusters UniGene:78599 (1)
    Sequence Information (all 12)
    OTHER gtf2b GENE PAGES
  • Alliance (1)
  • Gene:324823 (1)
  • VEGA:OTTDARG00000019200 (1)
  • Ensembl(GRCz11):ENSDARG00000103578 (1)
  • ORTHOLOGY for gtf2b (Chr: 2)
    CITATIONS (17)