Gene

papola

ID

ZDB-GENE-030131-3507

Name

poly(A) polymerase alpha

Symbol

papola Nomenclature History

Previous Names

papolb
si:ch211-199l3.6
wu:fc43b06 (1)
wu:fp01g10 (1)
zgc:109706

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to have polynucleotide adenylyltransferase activity. Predicted to be involved in mRNA polyadenylation. Predicted to localize to nucleus. Orthologous to human PAPOLA (poly(A) polymerase alpha).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7139044 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With papola Human Ortholog

No data available

Associated With papola Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002934	Polymerase, nucleotidyl transferase domain
Domain	IPR007010	Poly(A) polymerase, RNA-binding domain
Domain	IPR007012	Poly(A) polymerase, central domain
Family	IPR014492	Poly(A) polymerase
Homologous_superfamily	IPR011068	Nucleotidyltransferase, class I-like, C-terminal
Homologous_superfamily	IPR043519	Nucleotidyltransferase superfamily

Domain Details Per Protein

Protein	Length	Nucleotidyltransferase, class I-like, C-terminal	Nucleotidyltransferase superfamily	Poly(A) polymerase	Poly(A) polymerase, central domain	Poly(A) polymerase, RNA-binding domain	Polymerase, nucleotidyl transferase domain
UniProtKB:R4GDQ1 InterPro	107
UniProtKB:Q6AXI4 InterPro	435
UniProtKB:F1QJP5 InterPro	283
UniProtKB:Q5SNY2 InterPro	723
UniProtKB:A8WFY4 InterPro	436
UniProtKB:Q6TLF7 InterPro	386
UniProtKB:Q5SNY3 InterPro	449
UniProtKB:Q568X5 InterPro	283
UniProtKB:R4GE35 InterPro	189
UniProtKB:Q6P5K7 InterPro	436

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	papola-202 (1) Ensembl	3471 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	papola-204 (1) Ensembl	1610 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	papola-205 (1) Ensembl	639 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	papola-206 (1) Ensembl	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	papola-003 (1) Ensembl	570 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations