ZFIN ID: ZDB-GENE-030131-3375
Gene Name: AUP1, lipid droplet regulating VLDL assembly factor
Gene Symbol: aup1
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fc37d06, zgc:77755

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:73323]
  1 figure (1 image) from Thisse et al., 2004 [MGC:77755]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la012637Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019101Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH aup1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH aup1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ubiquitin-dependent ERAD pathway (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function ubiquitin binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003892 (1)
  • PROSITE:PS51140 (1)
  • Pfam:PF02845 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA aup1-001 (1) 1866
    aberrant processed transcript aup1-003 (1) 865
    ncRNA aup1-004 (1) 879
    aup1-005 (1) 455
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM aup1 No data available
    MARKER RELATIONSHIPS
    aup1Contained in: [BAC] CH73-305J1 (1) (order this)
    aup1Encodes: [EST] fc37d06
    [cDNA] MGC:73323 (1) (order this), MGC:77755 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199690 (1) 1836bp
    Genomic GenBank:FP085432 (1) 119093bp
    Select Tool
    Polypeptide UniProtKB:Q6PBN5 (1) 423aa
    Sequence Clusters UniGene:2621 (1)
    Sequence Information (all 19)
    OTHER aup1 GENE PAGES
  • Alliance (1)
  • Gene:324654 (1)
  • VEGA:OTTDARG00000031593 (1)
  • Ensembl(GRCz11):ENSDARG00000092609 (2)
  • ORTHOLOGY for aup1 (Chr: 14)
    CITATIONS (25)