ZFIN ID: ZDB-GENE-030131-3306
Gene Name: helicase-like transcription factor
Gene Symbol: hltf    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: smarca3 (1), wu:fc33f07

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have several functions, including ATP binding activity; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; and zinc ion binding activity. Orthologous to human HLTF (helicase like transcription factor).
Genome Resources: Alliance (1),  Gene:564651 (1),  Ensembl(GRCz11):ENSDARG00000026053 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12894 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-hltf N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hltf HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hltf VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function ATP binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000330 SNF2-related, N-terminal domain
    Domain IPR001650 Helicase, C-terminal
    Domain IPR001841 Zinc finger, RING-type
    Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
    Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
    Domain IPR014905 HIRAN domain
    Conserved_site IPR017907 Zinc finger, RING-type, conserved site
    Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
    Homologous_superfamily IPR038718 SNF2-like, N-terminal domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hltf-201 (1)    Ensembl 3062
    ncRNA hltf-002 (1)    Ensembl 719
    hltf-003 (1)    Ensembl 638
    hltf-004 (1)    Ensembl 741
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM hltf No data available
    MARKER RELATIONSHIPS
    hltf Contained in: [BAC] DKEY-4M11 (1) (order this)
    hltf Encodes: [EST] fc33f07
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005163376 (1)
    Genomic GenBank:CR788256 (1) 52648 bp
    Select Tool
    Polypeptide UniProtKB:B0V118 (1) 942 aa
    Sequence Information (all 27)
    ORTHOLOGY for hltf ( Chr: 2 )
    CITATIONS (17)