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ZIRC
ZFIN ID: ZDB-GENE-030131-3207
Gene Name: TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Gene Symbol: taf2
Sequence Ontology ID : SO:0000704

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Previous Names: fc30f02, fc56a05, wu:fc30f02, wu:fc56a05

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have chromatin binding activity and transcription regulatory region DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II and  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi2491Tg Transgenic Insertion Intron 2 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22760 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25004 Point Mutation Unknown Premature Stop ENU
    sa28589 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH taf2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal recessive non-syndromic intellectual disability Mental retardation, autosomal recessive 40 615599
    DISEASE ASSOCIATED WITH taf2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of transcription by RNA polymerase II (more)
    Cellular Component nucleus (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR016024 (1)
  • InterPro:IPR037813 (1)
  • InterPro:IPR042097 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA taf2-201 (1) 4401
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM taf2 No data available
    MARKER RELATIONSHIPS
    taf2Contained in: [BAC] CH211-93I7 (1) (order this), DKEY-59G8 (1) (order this)
    taf2Contains: [SNP] rs3728264 (1), rs3728265 (1), rs3728266 (1), rs3728267 (1), rs3728268 (1), rs3728269 (1), rs3728270 (1), rs3728271 (1)
    taf2Encodes: [EST] fc30f02, fc56a05
    [cDNA] MGC:123088 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003835 (1) 4376bp
    Genomic GenBank:CU104700 (1) 155195bp
    Select Tool
    Polypeptide UniProtKB:Q32PW3 (1) 1191aa
    Sequence Clusters UniGene:20641 (1)
    Sequence Information (all 25)
    ORTHOLOGY for taf2 (Chr: 16)
    CITATIONS (26)