Gene

cxxc5a

ID

ZDB-GENE-030131-3178

Name

CXXC finger protein 5a

Symbol

cxxc5a Nomenclature History

Previous Names

cxxc5
si:ch211-113h10.2
wid (1)
wu:fc29g12 (1)

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to have DNA binding activity and zinc ion binding activity. Involved in heart looping; pronephros development; and sprouting angiogenesis. Is expressed in atrium; cardiac ventricle; heart rudiment; heart tube; and presumptive mesoderm. Orthologous to human CXXC5 (CXXC finger protein 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 5 figures from 3 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cxxc5a Human Ortholog

No data available

Associated With cxxc5a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002857	Zinc finger, CXXC-type
Family	IPR040388	CXXC-type zinc finger protein CXXC4/CXXC5

Domain Details Per Protein

Protein	Length	CXXC-type zinc finger protein CXXC4/CXXC5	Zinc finger, CXXC-type
UniProtKB:A0A8M3AX14 InterPro	284
UniProtKB:E7FC24 InterPro	283

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cxxc5a-201 (1) Ensembl	Havana	2667 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations