ZFIN ID: ZDB-GENE-030131-3133
Gene Name: basic helix-loop-helix family, member e40
Gene Symbol: bhlhe40
Sequence Ontology ID : SO:0000704

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Previous Names: bhlhb2, DEC1 (1), Dec1 (1), wu:fc28a06, wu:fm54h07, zgc:76913

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 17 figures from 9 publications
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2004 [MGC:76913]
Wild-type Stages, Structures: Blastula:Sphere (4.0h-4.33h) to Adult (90d-730d, breeding adult)
  anatomical structure, blood, cerebellum, common cardinal vein (all 29) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16419 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21951 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa35135 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38854 Point Mutation Unknown Premature Stop ENU
    Targeting reagents: MO1-bhlhe40 (1), MO2-bhlhe40 (1)
    PHENOTYPE
    Data: Fig. 4 from Ben-Moshe et al., 2014
    Observed in: locomotor rhythm
    DISEASE ASSOCIATED WITH bhlhe40 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process circadian regulation of gene expression (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003650 (1)
  • InterPro:IPR011598 (1)
  • PROSITE:PS50888 (1)
  • PROSITE:PS51054 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF07527 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bhlhe40-001 (1) 2804
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM bhlhe40 No data available
    MARKER RELATIONSHIPS
    bhlhe40Contained in: [BAC] DKEYP-81F11 (1)
    bhlhe40Encodes: [EST] fc28a06, fm54h07 (1)
    [cDNA] MGC:76913 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212679 (1) 2743bp
    Genomic GenBank:BX914197 (1) 198600bp
    Select Tool
    Polypeptide UniProtKB:Q0D311 (1) 403aa
    Sequence Clusters UniGene:78721 (1)
    Sequence Information (all 18)
    OTHER bhlhe40 GENE PAGES
  • Alliance (1)
  • Gene:324413 (1)
  • VEGA:OTTDARG00000020440 (1)
  • Ensembl(GRCz10):ENSDARG00000004060 (1)
  • ORTHOLOGY for bhlhe40 (Chr: 11)
    CITATIONS (39)