syncripl

ID

ZDB-GENE-030131-3104

Name

synaptotagmin binding, cytoplasmic RNA interacting protein, like

Symbol

syncripl Nomenclature History

Previous Names

wu:fc27c07
zgc:55901

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable mRNA 5'-UTR binding activity. Predicted to be involved in CRD-mediated mRNA stabilization. Predicted to be located in cytoplasm. Predicted to be part of CRD-mediated mRNA stability complex and ribonucleoprotein complex. Predicted to be active in nucleus. Orthologous to human SYNCRIP (synaptotagmin binding cytoplasmic RNA interacting protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:55901 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With syncripl Human Ortholog

No data available

Associated With syncripl Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR034544	Heterogeneous nuclear ribonucleoprotein Q, RNA recognition motif 1
Domain	IPR041337	Heterogeneous nuclear ribonucleoprotein Q acidic domain
Family	IPR006535	HnRNP R/Q splicing factor
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily