ZFIN ID: ZDB-GENE-030131-3097
Gene Name: RAD54 like 2
Gene Symbol: rad54l2    Nomenclature History

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Previous Names: fc27a09, si:dkey-42i9.10, wu:fc27a09

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have ATP binding activity. Orthologous to human RAD54L2 (RAD54 like 2).
Genome Resources: Alliance (1),  Gene:558947 (1),  Ensembl(GRCz11):ENSDARG00000063031 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu1081]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6696 Point Mutation Unknown Premature Stop ENU
sa37441 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43779 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-rad54l2 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rad54l2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rad54l2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function ATP binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000330 SNF2-related, N-terminal domain
    Domain IPR001650 Helicase, C-terminal
    Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
    Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rad54l2-201 (1)    Ensembl 6178
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rad54l2 No data available
    MARKER RELATIONSHIPS
    rad54l2 Contained in: [BAC] DKEY-42I9 (1) (order this)
    rad54l2 Encodes: [EST] eu1081 (1), fc27a09
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005174005 (1) 6058 bp
    Genomic GenBank:BX465868 (1) 222195 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1R3L6 (1) 1437 aa
    Sequence Information (all 25)
    ORTHOLOGY for rad54l2 ( Chr: 22 )
    CITATIONS (18)