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ZIRC
ZFIN ID: ZDB-GENE-030131-2964
Gene Name: tropomyosin 4b
Gene Symbol: tpm4b
Sequence Ontology ID : SO:0000704

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Previous Names: TPM4-2 alpha (1), wu:fc22f09, zgc:63734

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to localize to the actin filament. Orthologous to human TPM4 (tropomyosin 4).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (6 images) from Thisse et al., 2004 [MGC:63734]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tpm4b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tpm4b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process actin filament organization (more)
Cellular Component actin filament (more)
Molecular Function actin filament binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000533 (1)
  • Pfam:PF00261 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA tpm4b-002 (1) 691
    mRNA tpm4b-203 (1) 2914
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tpm4b No data available
    MARKER RELATIONSHIPS
    tpm4bContained in: [Fosmid] CH1073-279P6 (1) (order this), CH1073-323J21 (1) (order this)
    tpm4bEncodes: [EST] fc22f09
    [cDNA] MGC:63734 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199675 (1) 1718bp
    Genomic GenBank:CU693492 (1) 36714bp
    Select Tool
    Polypeptide UniProtKB:A0A1L6UW65 (1) 284aa
    Sequence Clusters UniGene:76950 (1)
    Sequence Information (all 26)
    ORTHOLOGY for tpm4b (Chr: 2)
    CITATIONS (20)